Anyone know what the pin sticking out from the auger shaft is for?
That is a "stirrer pin" to ensure good distribution of the pellets, when they drop over the edge down into the burn pot.
The stirrer pin operates in the small pellet-reservoir between the end of the upper auger-blade and the edge of the drop chute.
In 2008 I also had my auger shaft pulled to replace the Nylatron bearing, just like you have it these days. I noticed that there was only one stirrer pin, but 180 degrees away on the other side of the shaft there was an empty hole, so one stirrer pin was missing!!
The auger shaft on your regular Quest and my Quest Plus looked like this originally. Note: Two stirrer pins:
It is your luck that you now have had your auger pulled for inspection and can be certain that the missing stirrer pin has not dropped down in the auger, causing potential severe damage to the auger mechanism by blocking the rotation. This must have been the case for the previous owner of my stove, since there are deep marks on the involved auger parts from a severe auger jam!
The stirrer pin is made of a "tube rivet" pressed into a predrilled hole of a smaller diameter. The rivet is sliced in the side and therefore it has a springy action in the radial direction. When they are pressed into a smaller diameter hole, the springy action is holding them in place, hopefully!
I don't know if "tube rivet" is the correct term in US-English, but I had an old Citroën car, where the door hinges were joined together by a longer version of these. They are made of hardened steel, so eventually they would grind a clearance in the hinge, thus making the doors "hang"
I made a mod to my auger shaft to avoid these unsafe "stirrer pins". A simple mod, actually: I removed the lonely stirrer pin, and drilled through the hole, all the way to the hole on the other side. Then I cut thread all the way through the hole, and screwed a threaded stud in here. With two tight nuts ( one on each side of the studs ), the "threaded stirrer stud" is now held safely in place.
It is of course vey important that the stirrer stud has the same length ( diameter ) as the original pins.
And BTW, the early Whitfield auger shafts had stirrer paddles instead of pins ( see pic below ) Why did Whitfield change the design from stirrer paddles to pins? I have made my thoughts about this, but will keep them from this posting to avoid derailing the thread.